Publications

2014

Devault, A.M., McLoughlin, K., Jaing, C., Gardner, S., Porter, T.M., Enk, J.M., Thissen, J., Allen, J., Borucki, M., DeWitte, S.N., Dhody, A.N., Poinar, H.N., 2014. Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array. Scientific reports 4, 4245.

Feld, G.K., El-Etr, S., Corzett, M.H., Hunter, M.S., Belhocine, K., Monack, D.M., Frank, M., Segelke, B.W., Rasley, A., 2014. Structure and function of REP34 implicates carboxypeptidase activity in Francisella tularensis host-cell invasion. The Journal of biological chemistry.

Fischer, N.O., Blanchette, C., Rasley, A., 2014. Enhancing the efficacy of innate immune agonists: could nanolipoprotein particles hold the key? Nanomedicine 9, 369-372.

Fischer, N.O., Rasley, A., Blanchette, C., 2014. Nanoparticles and antigen delivery: understanding the benefits and drawbacks of different delivery platforms. Nanomedicine 9, 373-376.

Fischer, N.O., Weilhammer, D.R., Dunkle, A., Thomas, C., Hwang, M., Corzett, M., Lychak, C., Mayer, W., Urbin, S., Collette, N., Chiun Chang, J., Loots, G.G., Rasley, A., Blanchette, C.D., 2014. Evaluation of nanolipoprotein particles (NLPs) as an in vivo delivery platform. PloS one 9, e93342.

Gardner, S.N., Jaing, C.J., Elsheikh, M.M., Pena, J., Hysom, D.A., Borucki, M.K., 2014. Multiplex degenerate primer design for targeted whole genome amplification of many viral genomes. Advances in bioinformatics 2014, 101894.

Laurence, T.A., Ly, S., Bourguet, F., Fischer, N.O., Coleman, M.A., 2014. Fluorescence correlation spectroscopy at micromolar concentrations without optical nanoconfinement. The journal of physical chemistry. B 118, 9662-9667.

Ly, S., Bourguet, F., Fischer, N.O., Lau, E.Y., Coleman, M.A., Laurence, T.A., 2014. Quantifying interactions of a membrane protein embedded in a lipid nanodisc using fluorescence correlation spectroscopy. Biophysical journal 106, L05-08.

Westrate, L.M., Drocco, J.A., Martin, K.R., Hlavacek, W.S., MacKeigan, J.P., 2014. Mitochondrial morphological features are associated with fission and fusion events. PloS one 9, e95265.

2013

Borucki, M.K., Allen, J.E., Chen-Harris, H., Zemla, A., Vanier, G., Mabery, S., Torres, C., Hullinger, P., Slezak, T., 2013. The role of viral population diversity in adaptation of bovine coronavirus to new host environments. PloS one 8, e52752.

Borucki, M.K., Chen-Harris, H., Lao, V., Vanier, G., Wadford, D.A., Messenger, S., Allen, J.E., 2013. Ultra-deep sequencing of intra-host rabies virus populations during cross-species transmission. PLoS neglected tropical diseases 7, e2555.

Chen-Harris, H., Borucki, M.K., Torres, C., Slezak, T.R., Allen, J.E., 2013. Ultra-deep mutant spectrum profiling: improving sequencing accuracy using overlapping read pairs. BMC genomics 14, 96.

Drocco, J.A., Olson Reichhardt, C.J., Reichhardt, C., Bishop, A.R., 2013. Static and dynamic phases for magnetic vortex matter with attractive and repulsive interactions. Journal of physics. Condensed matter : an Institute of Physics journal 25, 345703.

Fischer, N.O., Rasley, A., Corzett, M., Hwang, M.H., Hoeprich, P.D., Blanchette, C.D., 2013. Colocalized delivery of adjuvant and antigen using nanolipoprotein particles enhances the immune response to recombinant antigens. Journal of the American Chemical Society 135, 2044-2047.

Grady, S.L., Purdy, J.G., Rabinowitz, J.D., Shenk, T., 2013. Argininosuccinate synthetase 1 depletion produces a metabolic state conducive to herpes simplex virus 1 infection. Proceedings of the National Academy of Sciences of the United States of America 110, E5006-5015.

Weilhammer, D.R., Blanchette, C.D., Fischer, N.O., Alam, S., Loots, G.G., Corzett, M., Thomas, C., Lychak, C., Dunkle, A.D., Ruitenberg, J.J., Ghanekar, S.A., Sant, A.J., Rasley, A., 2013. The use of nanolipoprotein particles to enhance the immunostimulatory properties of innate immune agonists against lethal influenza challenge. Biomaterials 34, 10305-10318.

2012

Bourguet, F.A., Souza, B.E., Hinz, A.K., Coleman, M.A., Jackson, P.J., 2012. Characterization of a novel lytic protein encoded by the Bacillus cereus E33L gene ampD as a Bacillus anthracis antimicrobial protein. Applied and environmental microbiology 78, 3025-3027.

Drocco, J.A., Olson Reichhardt, C.J., Reichhardt, C., 2012. Bidirectional sorting of flocking particles in the presence of asymmetric barriers. Physical review. E, Statistical, nonlinear, and soft matter physics 85, 056102.

Drocco, J.A., Wieschaus, E.F., Tank, D.W., 2012. The synthesis-diffusion-degradation model explains Bicoid gradient formation in unfertilized eggs. Physical biology 9, 055004.

Dugan, L., Bearinger, J., Hinckley, A., Strout, C., Souza, B., 2012. Detection of Bacillus anthracis from spores and cells by loop-mediated isothermal amplification without sample preparation. Journal of microbiological methods 90, 280-284.

Grady, S.L., Hwang, J., Vastag, L., Rabinowitz, J.D., Shenk, T., 2012. Herpes simplex virus 1 infection activates poly(ADP-ribose) polymerase and triggers the degradation of poly(ADP-ribose) glycohydrolase. Journal of virology 86, 8259-8268.

Hobbs, E.C., Storz, G., 2012. Competition assays using barcoded deletion strains to gain insight into small RNA function. Methods in molecular biology (Clifton, N.J.) 905, 63-72.

Hobbs, E.C., Yin, X., Paul, B.J., Astarita, J.L., Storz, G., 2012. Conserved small protein associates with the multidrug efflux pump AcrB and differentially affects antibiotic resistance. Proceedings of the National Academy of Sciences of the United States of America 109, 16696-16701.

Weilhammer, D.R., Iavarone, A.T., Villegas, E.N., Brooks, G.A., Sinai, A.P., Sha, W.C., 2012. Host metabolism regulates growth and differentiation of Toxoplasma gondii. International journal for parasitology 42, 947-959.

2011

Banse, A.V., Hobbs, E.C., Losick, R., 2011. Phosphorylation of Spo0A by the histidine kinase KinD requires the lipoprotein med in Bacillus subtilis. Journal of bacteriology 193, 3949-3955.

Drocco, J.A., Grimm, O., Tank, D.W., Wieschaus, E., 2011. Measurement and perturbation of morphogen lifetime: effects on gradient shape. Biophysical journal 101, 1807-1815.

Drocco, J.A., Olson Reichhardt, C.J., Reichhardt, C., 2011. Characterizing plastic depinning dynamics with the fluctuation theorem. The European physical journal. E, Soft matter 34, 117.

Hobbs, E.C., Fontaine, F., Yin, X., Storz, G., 2011. An expanding universe of small proteins. Current opinion in microbiology 14, 167-173.

Rasley, A., 2011. Graduate training in immunology. Briefings in functional genomics 10, 321.

Vastag, L., Koyuncu, E., Grady, S.L., Shenk, T.E., Rabinowitz, J.D., 2011. Divergent effects of human cytomegalovirus and herpes simplex virus-1 on cellular metabolism. PLoS pathogens 7, e1002124.

Weilhammer, D.R., Rasley, A., 2011. Genetic approaches for understanding virulence in Toxoplasma gondii. Briefings in functional genomics 10, 365-373.